Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912350.1_cds_XP_016462423.1_55655
CDS Infomation

[gene=LOC107785595] [db_xref=GeneID:107785595] [protein=transcription factor bHLH49-like] [protein_id=XP_016462423.1] [location=join(47016..47807,47884..48093,48179..48244,48351..48419,48767..48838,48935..49123,49295..49382,49466..49503)] [gbkey=CDS]
Sequence

ATGGATATAGCTAGCAAGAATGACAGTGAACCCGAAAAGAGGAATAATGAAGAAGTCGTG
AATTATCAATCACCAAATATTTCCTCAGAATGGCAATTAAGTGGGAGCAATTTGACTAAT
GTGTCTATGGGGATGATTCAAAGTAACAATCAAATGGTTGATACATTTTGCCCTACTTCT
TGGGATCAGCCTACCAATTCGCCGAGCTTAGGCTTTTGTGATGCTAATGTTCAAATAAAT
CCTAGCACTTCAAATCCATTGGTAACACTCGGTCCTAATTGGACTCCAAATGCAATGTTG
AAAGGGGGAATGTTTTTACCTCCTGCTCCTATGATGCTCCCTCAAAGTTTAGCTCAGTTT
CCGGCTGATTCGGATTTTATTGAAAGAGCTGCAAGGTTTTCTTGCTTTAGTGGGGGGAAC
TTTGGTGACATGATGAACTCTTTTAGCTTGCCCGAGTCAATGAATCCTTACTATAGGGGA
CCCCCACCAATGCAGGGTCCTCGAGAGCTTTTAGCAAGTAATGGGTTGAAATCACCTTTT
GCTCAGAAGCAGCATTTGAGTAATGTGGCCGAAAGTTCCAAGGATGTTTCTTTAACTGTT
GACCATAGGGACACTGAAAGAAGCCCCCTCAAAAATGAGAAGAAGAGTGAAAATTTTGAT
GAAGTAGGTGCAGTCTCTGGTAATGAGTCTGGTGAGGCCGAATGTAGCGGCCGTCAAGAA
GAGATGGATGGTGCAGGCGAGGAGTCTTATGGAAAGAACATTGGCTCAAAGAAAAGAAAA
AGAGGTGGTAAGGATACTGAACCACAGCAGCCACCGGCTGAATCTGGTAAGGATCAAATT
GAAATTCAGAAAGCGGAACAAAACTTGAATTCAGTTGCCGGCAAGTCCGGTGGAAAGAAT
GGTAAGCAGGGGTCTCAAGCTTCAGATCCAACTAAAGAAGATTACATACATGTTCGGGCT
CGAAGAGGCCAGGCAACAAATAGCCATAGTCTTGCAGAAAGAATAAGGCGGGAGAAAATT
AGCGAACGGATGAAGTTTCTTCAGGATCTTGTACCTGGTTGCAACAAGGTCACGGGCAAA
GCTGTTATGCTGGATGAAATTATTAACTATGTACAGTCACTGCAAAGGCAGGTTGAGTTC
CTCTCAATGAAGCTTGCAACAGTCAACCCACAGCTGGATTTTAATATTGATGGGCTCCTA
GCCAAAAATATCCTCCAGTCTAGAGCAGGTCCTTCATCCTCGCTTGCTTTTCCACCTGAT
ATGACCATGCCGTATCCTCCCTTACATCCTCCACAGCCTGGTTATGGAATTCCTAGTGAT
GCATTTCGTAGAGCTATCACTCCCCATTTAGCCGCTACTAGTGGTGGGCCTAGTGAATAC
AAGCATCCTTCATCTGAGGGACCGAGTGTATGGGATAATGAGCTACATAATATTGTTCAA
ATGGGATTGAATTCAAGTATAGCTCTATCTAGTGAAGATTTAAGTGGTTCTTTGCCAGCA
GGCCGGATGAAAGCAGAACCTTGA

Peptide Sequence

PEP ID

XP_016462423.1
PEP Infomation

PREDICTED: transcription factor bHLH49-like [Nicotiana tabacum]
Sequence

MDIASKNDSEPEKRNNEEVVNYQSPNISSEWQLSGSNLTNVSMGMIQSNNQMVDTFCPTS
WDQPTNSPSLGFCDANVQINPSTSNPLVTLGPNWTPNAMLKGGMFLPPAPMMLPQSLAQF
PADSDFIERAARFSCFSGGNFGDMMNSFSLPESMNPYYRGPPPMQGPRELLASNGLKSPF
AQKQHLSNVAESSKDVSLTVDHRDTERSPLKNEKKSENFDEVGAVSGNESGEAECSGRQE
EMDGAGEESYGKNIGSKKRKRGGKDTEPQQPPAESGKDQIEIQKAEQNLNSVAGKSGGKN
GKQGSQASDPTKEDYIHVRARRGQATNSHSLAERIRREKISERMKFLQDLVPGCNKVTGK
AVMLDEIINYVQSLQRQVEFLSMKLATVNPQLDFNIDGLLAKNILQSRAGPSSSLAFPPD
MTMPYPPLHPPQPGYGIPSDAFRRAITPHLAATSGGPSEYKHPSSEGPSVWDNELHNIVQ
MGLNSSIALSSEDLSGSLPAGRMKAEP

Transcript Sequence

Gene sequence data has not been registered.